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🔬 Immunology · Method

Flow Cytometry (FACS)

Multi-parameter immune cell analysis
🎯 Difficulty ★★★ Advanced Duration About 4–6 h 🎯 Use Identify, phenotype and sort immune subsets such as T/B/NK cells
📖 Principle
Laser excites single cells; scatter/fluorescence detected in channels, gated to sort or quantify subsets
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📋 Workflow

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1

Cell preparation

1 h
Prepare single-cell suspension from blood or spleen, lyse RBCs or separate by density gradient
💡 Tip Enrich rare subsets first
⚠️ Caution Viability affects phenotype reliability
🧪 Materials for this step (click to shop by spec/brand)
2

Surface staining

1 h
Add fluorochrome-conjugated antibody panel, incubate at 4°C in dark and wash
💡 Tip Use FMO controls for calibration
⚠️ Caution Protect from light to prevent quenching
🧪 Materials for this step (click to shop by spec/brand)
3

Intracellular staining (optional)

1 h
For cytokines/transcription factors, permeabilize then stain intracellular antibodies
💡 Tip Maintain permeabilized environment after step
⚠️ Caution Surface markers distort after permeabilization
🧪 Materials for this step (click to shop by spec/brand)
4

Acquisition and analysis

2 h
Acquire on instrument, correct compensation with FMO/single-stains, gate to quantify immune subsets
💡 Tip Consistent gating ensures comparability
⚠️ Caution Watch spectral overlap in high-parameter panels
🧪 Materials for this step (click to shop by spec/brand)

⚠️ 5 Common Beginner Mistakes

  • Wrong compensation misclassifies subsets
  • Surface markers distort after permeabilization
  • Debris/doublets disturb analysis
  • Poor panel design causes severe overlap
  • Missing FMO controls hamper positivity

❓ FAQ

+What are FMO controls?
Fluorescence-minus-one controls keep all dyes except test channel to set positive gates.
+How to analyze T/B/NK subsets?
Gate lymphocyte subsets by a CD3/CD19/CD56 marker panel.
+Can immune cells be sorted?
Yes, FACS-Sort physically separates subsets for culture or functional studies.

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Data authenticity: Product categories from JW Supply Chain standard taxonomy; method→step→product connected. Last updated: 2026-08-23 · v3.0